Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM49BA6NDI0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 AC068587.7-201ENST00000641602 218 ntBASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM49BA6NDI0 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 AC010141.3-201ENST00000456659 717 ntBASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 DUX4L19-201ENST00000557448 1267 ntBASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 AC011298.3-201ENST00000615796 283 ntBASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM49BA6NDI0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM49BA6NDI0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 AC244015.2-201ENST00000616358 1861 ntBASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM49BA6NDI0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 AC131212.1-201ENST00000613771 668 ntBASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM49BA6NDI0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 AC087239.1-201ENST00000622671 572 ntBASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 OXCT2P1-201ENST00000447263 1535 ntBASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TRIM49BA6NDI0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM49BA6NDI0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 AC005229.4-201ENST00000610085 2198 ntBASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM49BA6NDI0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.7■■□□□ 1.39
TRIM49BA6NDI0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms