Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 FAM99A-202ENST00000538190 1989 ntBASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF103-CHMP3A0A140T963 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF103-CHMP3A0A140T963 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RNF103-CHMP3A0A140T963 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 AC073130.3-201ENST00000624389 2278 ntBASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 AL117332.1-201ENST00000622628 974 ntBASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF103-CHMP3A0A140T963 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF103-CHMP3A0A140T963 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF103-CHMP3A0A140T963 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 AC005229.4-201ENST00000610085 2198 ntBASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RNF103-CHMP3A0A140T963 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF103-CHMP3A0A140T963 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF103-CHMP3A0A140T963 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms