Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 ESRRAP2-201ENST00000418437 1549 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 AL391422.3-201ENST00000603791 2761 ntBASIC15.01□□□□□ -0.01
TRAV8-4A0A0B4J246 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 AC009086.3-201ENST00000623486 1008 ntBASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-4A0A0B4J246 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-4A0A0B4J246 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 HCG11-201ENST00000411553 5696 ntBASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 DUX4L4-201ENST00000566884 1269 ntBASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-4A0A0B4J246 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 AF106564.1-201ENST00000607058 2553 ntBASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 GUSBP5-202ENST00000510805 1989 ntBASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-4A0A0B4J246 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 AC009102.2-201ENST00000606772 1639 ntBASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 ECEL1P1-201ENST00000373592 1742 ntBASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 AL035685.1-201ENST00000636663 812 ntBASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-4A0A0B4J246 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms