Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 AC103724.3-201ENST00000564481 992 ntBASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV13-1A0A0B4J241 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRAV13-1A0A0B4J241 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV13-1A0A0B4J241 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV13-1A0A0B4J241 AC004687.1-201ENST00000579003 1625 ntBASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 AC103834.1-201ENST00000520383 144 ntBASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 AC137630.3-201ENST00000607245 391 ntBASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV13-1A0A0B4J241 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 AL033527.3-201ENST00000566366 1196 ntBASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 AL031848.2-201ENST00000607670 837 ntBASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 MIR6722-201ENST00000617286 78 ntBASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 AC012354.3-201ENST00000623734 483 ntBASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV13-1A0A0B4J241 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 RNF165-205ENST00000588679 2904 ntBASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 DUX4L4-201ENST00000566884 1269 ntBASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.93□□□□□ -0.02
TRAV13-1A0A0B4J241 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms