Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV19A0A0A6YYK7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV19A0A0A6YYK7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.34■■□□□ 1.17
TRAV19A0A0A6YYK7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV19A0A0A6YYK7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRAV19A0A0A6YYK7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 AP001160.3-201ENST00000601484 763 ntBASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.32■■□□□ 1.16
TRAV19A0A0A6YYK7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 HLA-L-209ENST00000420110 1011 ntBASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
TRAV19A0A0A6YYK7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 AC006970.2-201ENST00000450065 779 ntBASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 MFSD11-216ENST00000590393 1141 ntBASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 AC087742.1-201ENST00000575880 1738 ntBASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV19A0A0A6YYK7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 UBE2DNL-204ENST00000602536 740 ntBASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 AC137767.1-201ENST00000602918 1920 ntBASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRAV19A0A0A6YYK7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.28■■□□□ 1.16
TRAV19A0A0A6YYK7 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms