Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04436 AL451165.1-201ENST00000334441 328 ntBASIC11.1□□□□□ -0.63
P04436 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 KRT41P-201ENST00000393988 1293 ntBASIC11.1□□□□□ -0.63
P04436 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 AL356417.2-201ENST00000419064 395 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 BANF1P4-201ENST00000420029 270 ntBASIC11.1□□□□□ -0.63
P04436 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC11.1□□□□□ -0.63
P04436 PFN1P10-201ENST00000455962 327 ntBASIC11.1□□□□□ -0.63
P04436 AL513366.1-201ENST00000456427 1248 ntBASIC11.1□□□□□ -0.63
P04436 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC11.1□□□□□ -0.63
P04436 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC11.1□□□□□ -0.63
P04436 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
P04436 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04436 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC11.1□□□□□ -0.63
P04436 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC11.1□□□□□ -0.63
P04436 AL161669.3-201ENST00000618272 777 ntBASIC11.1□□□□□ -0.63
P04436 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04436 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
P04436 AL590483.3-201ENST00000623669 3580 ntBASIC11.1□□□□□ -0.63
P04436 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04436 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.1□□□□□ -0.63
P04436 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04436 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.1□□□□□ -0.63
P04436 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04436 KRT18P45-201ENST00000515347 1333 ntBASIC11.09□□□□□ -0.63
P04436 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC11.09□□□□□ -0.63
P04436 CICP5-201ENST00000424045 2215 ntBASIC11.09□□□□□ -0.63
P04436 LDLRAD1-204ENST00000545928 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.09□□□□□ -0.63
P04436 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 AC087164.2-201ENST00000624514 3130 ntBASIC11.09□□□□□ -0.63
P04436 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
P04436 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04436 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
P04436 AL391294.1-201ENST00000641352 4068 ntBASIC11.09□□□□□ -0.63
P04436 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC11.09□□□□□ -0.63
P04436 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04436 AC009549.1-201ENST00000603468 1686 ntBASIC11.09□□□□□ -0.63
P04436 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 OR13C9-201ENST00000259362 957 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P04436 TSPAN16-201ENST00000316737 1040 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P04436 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC11.09□□□□□ -0.63
P04436 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
P04436 LINC00539-202ENST00000423575 699 ntTSL 3 BASIC11.09□□□□□ -0.63
P04436 AC006987.2-201ENST00000434709 527 ntBASIC11.09□□□□□ -0.63
P04436 DICER1-AS1-201ENST00000435343 723 ntTSL 3 BASIC11.09□□□□□ -0.63
P04436 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC11.09□□□□□ -0.63
P04436 AL391822.1-201ENST00000452580 562 ntBASIC11.09□□□□□ -0.63
P04436 SNORD10-201ENST00000459579 142 ntBASIC11.09□□□□□ -0.63
P04436 TSACC-206ENST00000466306 477 ntTSL 3 BASIC11.09□□□□□ -0.63
P04436 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC11.09□□□□□ -0.63
P04436 AC018697.1-201ENST00000577354 472 ntTSL 4 BASIC11.09□□□□□ -0.63
P04436 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC11.09□□□□□ -0.63
P04436 AL512631.1-201ENST00000604086 840 ntBASIC11.09□□□□□ -0.63
P04436 MIR7704-201ENST00000610524 59 ntBASIC11.09□□□□□ -0.63
P04436 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC11.09□□□□□ -0.63
P04436 Metazoa_SRP.95-201ENST00000619648 282 ntBASIC11.09□□□□□ -0.63
P04436 FP236383.2-201ENST00000625598 923 ntBASIC11.09□□□□□ -0.63
P04436 FP236383.3-201ENST00000627981 923 ntBASIC11.09□□□□□ -0.63
P04436 FP671120.3-201ENST00000631211 923 ntBASIC11.09□□□□□ -0.63
P04436 AC093323.2-201ENST00000632154 976 ntBASIC11.09□□□□□ -0.63
P04436 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 NRXN3-218ENST00000635466 5254 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
P04436 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.09□□□□□ -0.63
P04436 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC11.09□□□□□ -0.63
P04436 LAMP5-201ENST00000246070 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.09□□□□□ -0.63
P04436 SPATA13-213ENST00000439928 1721 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC11.09□□□□□ -0.63
P04436 IMPDH1P11-201ENST00000567885 1504 ntBASIC11.09□□□□□ -0.63
P04436 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms