Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC12.89□□□□□ -0.35
LMO3Q8TAP4 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 RARB-203ENST00000437042 2775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 AL109618.1-201ENST00000434910 1683 ntBASIC12.89□□□□□ -0.35
LMO3Q8TAP4 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 ARHGEF9-213ENST00000624210 1888 ntTSL 2 BASIC12.89□□□□□ -0.35
LMO3Q8TAP4 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 GMEB2-202ENST00000370069 4011 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AL583844.1-201ENST00000424229 1724 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AL078604.2-201ENST00000430078 2002 ntTSL 2 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SPATA4-203ENST00000515234 2115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 COG6-204ENST00000455146 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 PEBP4-201ENST00000256404 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 RNU12-201ENST00000362512 150 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 MAGEA7P-201ENST00000436482 942 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SNORD10-201ENST00000459579 142 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AC116553.1-201ENST00000561752 397 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AC120498.5-201ENST00000561757 299 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 BIN3-212ENST00000640731 450 ntTSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 LINC01686-201ENST00000566297 1376 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 PPP1R17-201ENST00000342032 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ZBTB14-208ENST00000615385 3350 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 ANKLE2-208ENST00000542282 3302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 NPY1R-201ENST00000296533 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 BTG2-201ENST00000290551 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 UNC93A-202ENST00000366829 1810 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 CCT6P1-201ENST00000434500 1544 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LMO3Q8TAP4 AL008638.4-201ENST00000624792 1315 ntBASIC12.88□□□□□ -0.35
LMO3Q8TAP4 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AL662907.1-201ENST00000622988 1360 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 OR52M1-201ENST00000360213 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AC097533.1-201ENST00000413478 479 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RPSAP46-201ENST00000428316 882 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AC007881.1-201ENST00000437460 187 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 CAPNS2-201ENST00000457326 1016 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RN7SL225P-201ENST00000464648 298 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AC068298.1-201ENST00000465165 161 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 AACSP1-202ENST00000521412 1095 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 RPL10P8-201ENST00000522888 313 ntBASIC12.87□□□□□ -0.35
LMO3Q8TAP4 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC12.87□□□□□ -0.35
LMO3Q8TAP4 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms