Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.65■■□□□ 1.7
CYP46A1Q9Y6A2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CYP46A1Q9Y6A2 AC007375.3-201ENST00000600936 2314 ntBASIC25.64■■□□□ 1.7
CYP46A1Q9Y6A2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CYP46A1Q9Y6A2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
CYP46A1Q9Y6A2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CYP46A1Q9Y6A2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.64■■□□□ 1.69
CYP46A1Q9Y6A2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CYP46A1Q9Y6A2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.69
CYP46A1Q9Y6A2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 SLC47A1P1-202ENST00000449666 945 ntBASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 AC131212.1-201ENST00000613771 668 ntBASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CYP46A1Q9Y6A2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CYP46A1Q9Y6A2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CYP46A1Q9Y6A2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
CYP46A1Q9Y6A2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 OXCT2P1-201ENST00000447263 1535 ntBASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CYP46A1Q9Y6A2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 AP005435.1-201ENST00000529293 1178 ntBASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.58■■□□□ 1.69
CYP46A1Q9Y6A2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
CYP46A1Q9Y6A2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CYP46A1Q9Y6A2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CYP46A1Q9Y6A2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CYP46A1Q9Y6A2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 UNC93B3-201ENST00000308076 687 ntBASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CYP46A1Q9Y6A2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms