Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 AL512631.2-201ENST00000604634 923 ntBASIC20.34■□□□□ 0.85
GPC6Q9Y625 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GPC6Q9Y625 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GPC6Q9Y625 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC6Q9Y625 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GPC6Q9Y625 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GPC6Q9Y625 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.33■□□□□ 0.85
GPC6Q9Y625 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GPC6Q9Y625 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.33■□□□□ 0.85
GPC6Q9Y625 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.33■□□□□ 0.85
GPC6Q9Y625 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
GPC6Q9Y625 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
GPC6Q9Y625 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC6Q9Y625 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GPC6Q9Y625 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GPC6Q9Y625 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.32■□□□□ 0.84
GPC6Q9Y625 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GPC6Q9Y625 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GPC6Q9Y625 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 AL499627.2-201ENST00000606283 725 ntBASIC20.31■□□□□ 0.84
GPC6Q9Y625 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
GPC6Q9Y625 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC6Q9Y625 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC131281.2-201ENST00000520478 145 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 CA15P2-201ENST00000611168 834 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC241377.3-202ENST00000626088 1088 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC241585.3-202ENST00000628937 1088 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC245100.8-202ENST00000629247 1058 ntBASIC20.3■□□□□ 0.84
GPC6Q9Y625 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC6Q9Y625 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC6Q9Y625 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC6Q9Y625 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC6Q9Y625 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC6Q9Y625 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC6Q9Y625 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC6Q9Y625 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
GPC6Q9Y625 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC6Q9Y625 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC6Q9Y625 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC6Q9Y625 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms