Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 FEM1AP4-201ENST00000443167 1987 ntBASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.02□□□□□ -0.01
UBE2D4Q9Y2X8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 KRT8P33-201ENST00000508125 1423 ntBASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 AC021242.3-201ENST00000607598 1377 ntBASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 AC009102.2-201ENST00000606772 1639 ntBASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2D4Q9Y2X8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 AL031848.2-201ENST00000607670 837 ntBASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 AC073130.3-201ENST00000624389 2278 ntBASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBE2D4Q9Y2X8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 AF106564.1-201ENST00000607058 2553 ntBASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBE2D4Q9Y2X8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.98□□□□□ -0.01
UBE2D4Q9Y2X8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.97□□□□□ -0.01
UBE2D4Q9Y2X8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms