Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 LINC01529-204ENST00000636474 1715 ntBASIC19.23■□□□□ 0.67
SSR3Q9UNL2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 MIR639-201ENST00000384974 98 ntBASIC19.23■□□□□ 0.67
SSR3Q9UNL2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.23■□□□□ 0.67
SSR3Q9UNL2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 GPX1-201ENST00000419349 1106 ntBASIC19.22■□□□□ 0.67
SSR3Q9UNL2 AC022616.5-201ENST00000518796 181 ntBASIC19.22■□□□□ 0.67
SSR3Q9UNL2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSR3Q9UNL2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSR3Q9UNL2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR3Q9UNL2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSR3Q9UNL2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 DUX4L9-201ENST00000449051 1259 ntBASIC19.18■□□□□ 0.66
SSR3Q9UNL2 AC009086.3-201ENST00000623486 1008 ntBASIC19.18■□□□□ 0.66
SSR3Q9UNL2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 AF131216.4-201ENST00000638924 1588 ntBASIC19.18■□□□□ 0.66
SSR3Q9UNL2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR3Q9UNL2 FP325331.1-202ENST00000623531 1380 ntBASIC19.18■□□□□ 0.66
SSR3Q9UNL2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 CA15P2-201ENST00000611168 834 ntBASIC19.17■□□□□ 0.66
SSR3Q9UNL2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR3Q9UNL2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms