Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD9Q9P000 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
COMMD9Q9P000 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 AIRN-201ENST00000601203 4374 ntBASIC18.32■□□□□ 0.52
COMMD9Q9P000 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COMMD9Q9P000 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD9Q9P000 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD9Q9P000 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COMMD9Q9P000 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 NTF6A-201ENST00000591175 560 ntBASIC18.31■□□□□ 0.52
COMMD9Q9P000 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD9Q9P000 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD9Q9P000 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 AC010542.4-201ENST00000563151 1910 ntBASIC18.3■□□□□ 0.52
COMMD9Q9P000 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 AC120024.1-201ENST00000562672 995 ntBASIC18.3■□□□□ 0.52
COMMD9Q9P000 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 AC074183.2-201ENST00000623112 922 ntBASIC18.3■□□□□ 0.52
COMMD9Q9P000 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD9Q9P000 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COMMD9Q9P000 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD9Q9P000 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD9Q9P000 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD9Q9P000 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD9Q9P000 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD9Q9P000 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.29■□□□□ 0.52
COMMD9Q9P000 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 DUX4L18-201ENST00000553347 1267 ntBASIC18.28■□□□□ 0.52
COMMD9Q9P000 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD9Q9P000 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD9Q9P000 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD9Q9P000 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 KRT18P24-201ENST00000344739 1156 ntBASIC18.27■□□□□ 0.52
COMMD9Q9P000 THA1P-201ENST00000590384 1145 ntBASIC18.27■□□□□ 0.52
COMMD9Q9P000 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
COMMD9Q9P000 RNF165-205ENST00000588679 2904 ntBASIC18.27■□□□□ 0.52
COMMD9Q9P000 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COMMD9Q9P000 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
COMMD9Q9P000 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COMMD9Q9P000 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms