Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
THUMPD1Q9NXG2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 MIR3621-201ENST00000580529 85 ntBASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 pRNA.6-201ENST00000610482 90 ntBASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 pRNA.5-201ENST00000612139 90 ntBASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 pRNA.11-201ENST00000618423 90 ntBASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 pRNA.13-201ENST00000619112 90 ntBASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
THUMPD1Q9NXG2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
THUMPD1Q9NXG2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.27■□□□□ 0.83
THUMPD1Q9NXG2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THUMPD1Q9NXG2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 GUSBP5-201ENST00000418136 578 ntBASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.26■□□□□ 0.83
THUMPD1Q9NXG2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THUMPD1Q9NXG2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 SRD5A1P1-201ENST00000442297 786 ntBASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 AC079089.2-201ENST00000531211 1277 ntBASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 AC099791.2-201ENST00000605725 427 ntBASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
THUMPD1Q9NXG2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.23■□□□□ 0.83
THUMPD1Q9NXG2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 AC006455.2-201ENST00000429931 906 ntBASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 AC087239.1-201ENST00000622671 572 ntBASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.22■□□□□ 0.83
THUMPD1Q9NXG2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
THUMPD1Q9NXG2 OR2I1P-207ENST00000453522 948 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms