Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM7Q9NR12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 MFSD11-216ENST00000590393 1141 ntBASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.37■■□□□ 1.49
PDLIM7Q9NR12 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 TSPY6P-201ENST00000448518 926 ntBASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM7Q9NR12 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 GUSBP6-202ENST00000438529 1198 ntBASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 AC083906.2-201ENST00000511578 360 ntBASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 MIR4651-201ENST00000582622 73 ntBASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 DUSP8P5-201ENST00000422884 1815 ntBASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PDLIM7Q9NR12 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM7Q9NR12 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM7Q9NR12 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PDLIM7Q9NR12 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.48
PDLIM7Q9NR12 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 AC068587.7-201ENST00000641602 218 ntBASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM7Q9NR12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 SLC7A5P2-201ENST00000553010 536 ntBASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDLIM7Q9NR12 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.3■■□□□ 1.48
PDLIM7Q9NR12 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms