Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KCNMB3Q9NPA1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNMB3Q9NPA1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 YBX1P1-201ENST00000445822 960 ntBASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNMB3Q9NPA1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 ECEL1P1-201ENST00000373592 1742 ntBASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 AC026271.2-201ENST00000428091 497 ntBASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KCNMB3Q9NPA1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 AC123595.1-201ENST00000440769 1046 ntBASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 AL117328.2-201ENST00000624617 1940 ntBASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNMB3Q9NPA1 AP004607.7-201ENST00000527152 1677 ntBASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 MIR6821-201ENST00000617625 74 ntBASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
KCNMB3Q9NPA1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 AC097381.1-201ENST00000429019 1296 ntBASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 RARRES2P6-201ENST00000567333 442 ntBASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KCNMB3Q9NPA1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 AC092053.2-201ENST00000640557 1818 ntBASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.32■■□□□ 1.48
KCNMB3Q9NPA1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms