Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDH18Q9HCL0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 AC233992.3-201ENST00000607491 485 ntBASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 AC106739.1-201ENST00000617035 715 ntBASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH18Q9HCL0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 FAM99A-202ENST00000538190 1989 ntBASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH18Q9HCL0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH18Q9HCL0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH18Q9HCL0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH18Q9HCL0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH18Q9HCL0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH18Q9HCL0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH18Q9HCL0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH18Q9HCL0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH18Q9HCL0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH18Q9HCL0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 AC133561.4-201ENST00000566112 224 ntBASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 FBXW4P1-201ENST00000426721 2239 ntBASIC22.37■■□□□ 1.17
PCDH18Q9HCL0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 AC008764.7-201ENST00000593779 1081 ntBASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH18Q9HCL0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 AC010542.4-201ENST00000563151 1910 ntBASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH18Q9HCL0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms