Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 LINC01529-204ENST00000636474 1715 ntBASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 AC242852.2-201ENST00000615738 1807 ntBASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
LIN28AQ9H9Z2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 AL031432.3-201ENST00000607698 485 ntBASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 AC092068.2-201ENST00000590491 1708 ntBASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 AL353803.4-201ENST00000565882 1934 ntBASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN28AQ9H9Z2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 FP325331.1-202ENST00000623531 1380 ntBASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 AC133561.4-201ENST00000566112 224 ntBASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LIN28AQ9H9Z2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LIN28AQ9H9Z2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LIN28AQ9H9Z2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.64■□□□□ 0.9
LIN28AQ9H9Z2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 AC142381.2-201ENST00000566120 298 ntBASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.64■□□□□ 0.89
LIN28AQ9H9Z2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 DUX4L4-201ENST00000566884 1269 ntBASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
LIN28AQ9H9Z2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 SUDS3P1-201ENST00000505831 966 ntBASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 AL138724.1-201ENST00000606771 1088 ntBASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 AC011298.3-201ENST00000615796 283 ntBASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 AL355001.2-201ENST00000620617 1191 ntBASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LIN28AQ9H9Z2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 EDA-201ENST00000338901 1233 ntBASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 AF213884.3-201ENST00000563833 479 ntBASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 AC008764.7-201ENST00000593779 1081 ntBASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN28AQ9H9Z2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms