Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCNX3Q9H6A9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCNX3Q9H6A9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCNX3Q9H6A9 AP004607.7-201ENST00000527152 1677 ntBASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 AC026471.6-201ENST00000622954 1905 ntBASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 AL358852.1-201ENST00000623174 1268 ntBASIC19.66■□□□□ 0.74
PCNX3Q9H6A9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCNX3Q9H6A9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 AC087623.3-201ENST00000607047 1098 ntBASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCNX3Q9H6A9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNX3Q9H6A9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.63■□□□□ 0.73
PCNX3Q9H6A9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 KRT18P14-201ENST00000534205 1250 ntBASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 FAM99A-202ENST00000538190 1989 ntBASIC19.62■□□□□ 0.73
PCNX3Q9H6A9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 BX005040.4-201ENST00000637145 1518 ntBASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCNX3Q9H6A9 AL354811.1-201ENST00000610286 706 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms