Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK3Q9H422 AC010536.3-201ENST00000620306 533 ntBASIC23.79■■□□□ 1.4
HIPK3Q9H422 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK3Q9H422 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HIPK3Q9H422 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HIPK3Q9H422 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK3Q9H422 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK3Q9H422 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK3Q9H422 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 AC008687.6-201ENST00000596318 630 ntBASIC23.78■■□□□ 1.4
HIPK3Q9H422 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIPK3Q9H422 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
HIPK3Q9H422 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
HIPK3Q9H422 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.77■■□□□ 1.4
HIPK3Q9H422 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.77■■□□□ 1.4
HIPK3Q9H422 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.77■■□□□ 1.4
HIPK3Q9H422 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 AC004812.2-201ENST00000611079 2094 ntBASIC23.77■■□□□ 1.4
HIPK3Q9H422 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIPK3Q9H422 AC055733.4-201ENST00000638462 1354 ntBASIC23.77■■□□□ 1.4
HIPK3Q9H422 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK3Q9H422 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK3Q9H422 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
HIPK3Q9H422 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK3Q9H422 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.76■■□□□ 1.39
HIPK3Q9H422 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.76■■□□□ 1.39
HIPK3Q9H422 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.76■■□□□ 1.39
HIPK3Q9H422 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK3Q9H422 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
HIPK3Q9H422 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIPK3Q9H422 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK3Q9H422 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK3Q9H422 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 POU5F1P3-201ENST00000428824 1078 ntBASIC23.75■■□□□ 1.39
HIPK3Q9H422 AC010141.2-201ENST00000452426 721 ntBASIC23.75■■□□□ 1.39
HIPK3Q9H422 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK3Q9H422 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK3Q9H422 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIPK3Q9H422 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.75■■□□□ 1.39
HIPK3Q9H422 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.74■■□□□ 1.39
HIPK3Q9H422 LINC01124-201ENST00000409786 2117 ntBASIC23.74■■□□□ 1.39
HIPK3Q9H422 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIPK3Q9H422 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.74■■□□□ 1.39
HIPK3Q9H422 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIPK3Q9H422 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.74■■□□□ 1.39
HIPK3Q9H422 KRT18P20-201ENST00000548986 1279 ntBASIC23.74■■□□□ 1.39
HIPK3Q9H422 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.74■■□□□ 1.39
HIPK3Q9H422 MIR4758-201ENST00000577688 71 ntBASIC23.74■■□□□ 1.39
HIPK3Q9H422 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIPK3Q9H422 DUSP8P5-201ENST00000422884 1815 ntBASIC23.74■■□□□ 1.39
HIPK3Q9H422 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIPK3Q9H422 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.74■■□□□ 1.39
HIPK3Q9H422 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
HIPK3Q9H422 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
HIPK3Q9H422 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.73■■□□□ 1.39
HIPK3Q9H422 AL139125.2-201ENST00000623134 1869 ntBASIC23.73■■□□□ 1.39
HIPK3Q9H422 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIPK3Q9H422 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.73■■□□□ 1.39
HIPK3Q9H422 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.73■■□□□ 1.39
HIPK3Q9H422 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.73■■□□□ 1.39
HIPK3Q9H422 AC138907.5-202ENST00000569484 235 ntBASIC23.73■■□□□ 1.39
HIPK3Q9H422 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.72■■□□□ 1.39
HIPK3Q9H422 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.72■■□□□ 1.39
HIPK3Q9H422 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.72■■□□□ 1.39
HIPK3Q9H422 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 ITM2C-210ENST00000620962 501 ntBASIC23.72■■□□□ 1.39
HIPK3Q9H422 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.72■■□□□ 1.39
HIPK3Q9H422 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIPK3Q9H422 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIPK3Q9H422 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
HIPK3Q9H422 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms