Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA1CQ9BQE3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA1CQ9BQE3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
TUBA1CQ9BQE3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TUBA1CQ9BQE3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA1CQ9BQE3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 AC133561.4-201ENST00000566112 224 ntBASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBA1CQ9BQE3 C17orf82-201ENST00000623772 1530 ntBASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 AC079630.1-202ENST00000618127 1840 ntBASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 AC099791.2-201ENST00000605725 427 ntBASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA1CQ9BQE3 AC135279.3-201ENST00000610945 1311 ntBASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 AC024257.2-201ENST00000549699 147 ntBASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 DUX4L19-201ENST00000557448 1267 ntBASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 AC092171.4-201ENST00000609130 632 ntBASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA1CQ9BQE3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
TUBA1CQ9BQE3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.27■□□□□ 0.83
TUBA1CQ9BQE3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 FAM99A-202ENST00000538190 1989 ntBASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA1CQ9BQE3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SYT6-210ENST00000641643 1587 ntBASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA1CQ9BQE3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBA1CQ9BQE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBA1CQ9BQE3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBA1CQ9BQE3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms