Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VRK1Q99986 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.95■□□□□ 0.62
VRK1Q99986 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VRK1Q99986 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.94■□□□□ 0.62
VRK1Q99986 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.94■□□□□ 0.62
VRK1Q99986 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VRK1Q99986 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.94■□□□□ 0.62
VRK1Q99986 DUX4L4-201ENST00000566884 1269 ntBASIC18.94■□□□□ 0.62
VRK1Q99986 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.94■□□□□ 0.62
VRK1Q99986 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VRK1Q99986 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VRK1Q99986 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VRK1Q99986 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.93■□□□□ 0.62
VRK1Q99986 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.93■□□□□ 0.62
VRK1Q99986 AC026271.2-201ENST00000428091 497 ntBASIC18.93■□□□□ 0.62
VRK1Q99986 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.93■□□□□ 0.62
VRK1Q99986 MIR5787-201ENST00000611784 55 ntBASIC18.93■□□□□ 0.62
VRK1Q99986 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.93■□□□□ 0.62
VRK1Q99986 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
VRK1Q99986 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VRK1Q99986 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VRK1Q99986 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK1Q99986 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK1Q99986 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VRK1Q99986 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.92■□□□□ 0.62
VRK1Q99986 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK1Q99986 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.92■□□□□ 0.62
VRK1Q99986 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.92■□□□□ 0.62
VRK1Q99986 AL499627.2-201ENST00000606283 725 ntBASIC18.92■□□□□ 0.62
VRK1Q99986 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.92■□□□□ 0.62
VRK1Q99986 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VRK1Q99986 TSPY26P-201ENST00000476365 1326 ntBASIC18.92■□□□□ 0.62
VRK1Q99986 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
VRK1Q99986 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VRK1Q99986 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.92■□□□□ 0.62
VRK1Q99986 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VRK1Q99986 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.91■□□□□ 0.62
VRK1Q99986 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VRK1Q99986 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.91■□□□□ 0.62
VRK1Q99986 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.91■□□□□ 0.62
VRK1Q99986 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.91■□□□□ 0.62
VRK1Q99986 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
VRK1Q99986 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VRK1Q99986 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK1Q99986 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK1Q99986 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VRK1Q99986 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK1Q99986 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VRK1Q99986 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
VRK1Q99986 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VRK1Q99986 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.89■□□□□ 0.62
VRK1Q99986 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VRK1Q99986 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.89■□□□□ 0.62
VRK1Q99986 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
VRK1Q99986 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
VRK1Q99986 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VRK1Q99986 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK1Q99986 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VRK1Q99986 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.89■□□□□ 0.61
VRK1Q99986 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK1Q99986 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VRK1Q99986 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.89■□□□□ 0.61
VRK1Q99986 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VRK1Q99986 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms