Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP4Q99727 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP4Q99727 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TIMP4Q99727 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP4Q99727 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TIMP4Q99727 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP4Q99727 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.84■□□□□ 0.77
TIMP4Q99727 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TIMP4Q99727 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TIMP4Q99727 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP4Q99727 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.84■□□□□ 0.77
TIMP4Q99727 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.84■□□□□ 0.77
TIMP4Q99727 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.84■□□□□ 0.77
TIMP4Q99727 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP4Q99727 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.84■□□□□ 0.77
TIMP4Q99727 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.84■□□□□ 0.77
TIMP4Q99727 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TIMP4Q99727 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TIMP4Q99727 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
TIMP4Q99727 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP4Q99727 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP4Q99727 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.83■□□□□ 0.77
TIMP4Q99727 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TIMP4Q99727 AL358852.1-201ENST00000623174 1268 ntBASIC19.83■□□□□ 0.77
TIMP4Q99727 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP4Q99727 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
TIMP4Q99727 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP4Q99727 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.83■□□□□ 0.76
TIMP4Q99727 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP4Q99727 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
TIMP4Q99727 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMP4Q99727 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.83■□□□□ 0.76
TIMP4Q99727 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP4Q99727 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TIMP4Q99727 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP4Q99727 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TIMP4Q99727 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TIMP4Q99727 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP4Q99727 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP4Q99727 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
TIMP4Q99727 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TIMP4Q99727 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TIMP4Q99727 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TIMP4Q99727 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.81■□□□□ 0.76
TIMP4Q99727 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
TIMP4Q99727 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TIMP4Q99727 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TIMP4Q99727 AC080038.3-201ENST00000623346 1952 ntBASIC19.81■□□□□ 0.76
TIMP4Q99727 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TIMP4Q99727 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMP4Q99727 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.8■□□□□ 0.76
TIMP4Q99727 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TIMP4Q99727 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMP4Q99727 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.8■□□□□ 0.76
TIMP4Q99727 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.8■□□□□ 0.76
TIMP4Q99727 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
TIMP4Q99727 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.8■□□□□ 0.76
TIMP4Q99727 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.8■□□□□ 0.76
TIMP4Q99727 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.8■□□□□ 0.76
TIMP4Q99727 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMP4Q99727 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMP4Q99727 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMP4Q99727 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TIMP4Q99727 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 AL137060.1-201ENST00000618151 2648 ntBASIC19.79■□□□□ 0.76
TIMP4Q99727 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.79■□□□□ 0.76
TIMP4Q99727 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.79■□□□□ 0.76
TIMP4Q99727 AL354811.1-201ENST00000610286 706 ntBASIC19.79■□□□□ 0.76
TIMP4Q99727 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.79■□□□□ 0.76
TIMP4Q99727 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMP4Q99727 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMP4Q99727 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms