Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF2Q99496 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF2Q99496 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF2Q99496 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF2Q99496 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF2Q99496 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF2Q99496 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF2Q99496 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF2Q99496 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF2Q99496 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF2Q99496 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF2Q99496 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF2Q99496 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RNF2Q99496 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF2Q99496 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF2Q99496 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF2Q99496 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF2Q99496 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF2Q99496 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RNF2Q99496 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF2Q99496 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF2Q99496 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
RNF2Q99496 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF2Q99496 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF2Q99496 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RNF2Q99496 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF2Q99496 FP325331.1-202ENST00000623531 1380 ntBASIC17.08■□□□□ 0.32
RNF2Q99496 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF2Q99496 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF2Q99496 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF2Q99496 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF2Q99496 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF2Q99496 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF2Q99496 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF2Q99496 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF2Q99496 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF2Q99496 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF2Q99496 LINC01529-204ENST00000636474 1715 ntBASIC17.07■□□□□ 0.32
RNF2Q99496 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 AC092667.1-201ENST00000434301 2586 ntBASIC17.07■□□□□ 0.32
RNF2Q99496 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF2Q99496 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF2Q99496 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF2Q99496 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF2Q99496 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF2Q99496 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF2Q99496 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
RNF2Q99496 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RNF2Q99496 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF2Q99496 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF2Q99496 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF2Q99496 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 AL356441.2-201ENST00000443009 864 ntBASIC17.06■□□□□ 0.32
RNF2Q99496 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF2Q99496 AC009086.3-201ENST00000623486 1008 ntBASIC17.06■□□□□ 0.32
RNF2Q99496 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF2Q99496 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF2Q99496 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF2Q99496 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF2Q99496 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF2Q99496 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF2Q99496 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF2Q99496 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF2Q99496 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms