Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.11■□□□□ 0.65
USP9XQ93008 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.11■□□□□ 0.65
USP9XQ93008 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
USP9XQ93008 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 AC016405.3-201ENST00000607710 860 ntBASIC19.11■□□□□ 0.65
USP9XQ93008 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.11■□□□□ 0.65
USP9XQ93008 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.11■□□□□ 0.65
USP9XQ93008 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP9XQ93008 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP9XQ93008 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP9XQ93008 AC055733.4-201ENST00000638462 1354 ntBASIC19.1■□□□□ 0.65
USP9XQ93008 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USP9XQ93008 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP9XQ93008 AC010141.2-201ENST00000452426 721 ntBASIC19.1■□□□□ 0.65
USP9XQ93008 AC091874.3-201ENST00000512672 1195 ntBASIC19.1■□□□□ 0.65
USP9XQ93008 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.1■□□□□ 0.65
USP9XQ93008 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP9XQ93008 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP9XQ93008 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.1■□□□□ 0.65
USP9XQ93008 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP9XQ93008 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.09■□□□□ 0.65
USP9XQ93008 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.09■□□□□ 0.65
USP9XQ93008 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.09■□□□□ 0.65
USP9XQ93008 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.09■□□□□ 0.65
USP9XQ93008 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.09■□□□□ 0.65
USP9XQ93008 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.09■□□□□ 0.65
USP9XQ93008 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.09■□□□□ 0.65
USP9XQ93008 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.09■□□□□ 0.65
USP9XQ93008 LINC01023-201ENST00000606054 436 ntBASIC19.09■□□□□ 0.65
USP9XQ93008 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP9XQ93008 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP9XQ93008 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP9XQ93008 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.08■□□□□ 0.65
USP9XQ93008 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.08■□□□□ 0.65
USP9XQ93008 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
USP9XQ93008 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.08■□□□□ 0.65
USP9XQ93008 AL445228.2-201ENST00000605589 952 ntBASIC19.08■□□□□ 0.65
USP9XQ93008 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
USP9XQ93008 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.08■□□□□ 0.65
USP9XQ93008 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USP9XQ93008 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP9XQ93008 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP9XQ93008 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
USP9XQ93008 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.08■□□□□ 0.64
USP9XQ93008 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP9XQ93008 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP9XQ93008 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.08■□□□□ 0.64
USP9XQ93008 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP9XQ93008 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
USP9XQ93008 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.08■□□□□ 0.64
USP9XQ93008 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.08■□□□□ 0.64
USP9XQ93008 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.07■□□□□ 0.64
USP9XQ93008 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.07■□□□□ 0.64
USP9XQ93008 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.07■□□□□ 0.64
USP9XQ93008 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
USP9XQ93008 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USP9XQ93008 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP9XQ93008 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP9XQ93008 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP9XQ93008 MIR718-201ENST00000390190 70 ntBASIC19.06■□□□□ 0.64
USP9XQ93008 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.06■□□□□ 0.64
USP9XQ93008 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.06■□□□□ 0.64
USP9XQ93008 AC068587.7-201ENST00000641602 218 ntBASIC19.06■□□□□ 0.64
USP9XQ93008 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP9XQ93008 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP9XQ93008 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
USP9XQ93008 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP9XQ93008 AL512625.2-201ENST00000417533 625 ntBASIC19.06■□□□□ 0.64
USP9XQ93008 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP9XQ93008 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 AC093787.1-201ENST00000450396 207 ntBASIC19.05■□□□□ 0.64
USP9XQ93008 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.05■□□□□ 0.64
USP9XQ93008 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.05■□□□□ 0.64
USP9XQ93008 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP9XQ93008 AC009237.3-201ENST00000393279 1427 ntBASIC19.05■□□□□ 0.64
USP9XQ93008 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
USP9XQ93008 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.05■□□□□ 0.64
USP9XQ93008 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.05■□□□□ 0.64
USP9XQ93008 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP9XQ93008 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP9XQ93008 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms