Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM40Q8WWA1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM40Q8WWA1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.64■■□□□ 1.38
TMEM40Q8WWA1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TMEM40Q8WWA1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.64■■□□□ 1.38
TMEM40Q8WWA1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM40Q8WWA1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM40Q8WWA1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM40Q8WWA1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM40Q8WWA1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM40Q8WWA1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 MFSD11-216ENST00000590393 1141 ntBASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 AP004607.7-201ENST00000527152 1677 ntBASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TMEM40Q8WWA1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 KRT18P11-201ENST00000435214 1283 ntBASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM40Q8WWA1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM40Q8WWA1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 AC087742.1-201ENST00000575880 1738 ntBASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.6■■□□□ 1.37
TMEM40Q8WWA1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 UBE2DNL-204ENST00000602536 740 ntBASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 OR7E47P-201ENST00000546390 1422 ntBASIC23.59■■□□□ 1.37
TMEM40Q8WWA1 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM40Q8WWA1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
TMEM40Q8WWA1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM40Q8WWA1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM40Q8WWA1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM40Q8WWA1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms