Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL22A1Q8NFW1 AL512625.2-201ENST00000417533 625 ntBASIC29.4■■■□□ 2.3
COL22A1Q8NFW1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL22A1Q8NFW1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
COL22A1Q8NFW1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
COL22A1Q8NFW1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.39■■■□□ 2.3
COL22A1Q8NFW1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 TERF1P5-201ENST00000477545 1207 ntBASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 BX276092.2-201ENST00000417668 665 ntBASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 AC128676.1-201ENST00000454392 318 ntBASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
COL22A1Q8NFW1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL22A1Q8NFW1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC29.37■■■□□ 2.29
COL22A1Q8NFW1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 AC091874.3-201ENST00000512672 1195 ntBASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
COL22A1Q8NFW1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 DUSP8P5-201ENST00000422884 1815 ntBASIC29.35■■■□□ 2.29
COL22A1Q8NFW1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL22A1Q8NFW1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 UNC93B5-201ENST00000530315 699 ntBASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC29.33■■■□□ 2.29
COL22A1Q8NFW1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 AC069236.1-201ENST00000604339 616 ntBASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
COL22A1Q8NFW1 AC008550.1-201ENST00000511500 884 ntBASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC29.31■■■□□ 2.28
COL22A1Q8NFW1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 AP003097.1-201ENST00000530657 1135 ntBASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 DUSP8P3-201ENST00000399571 1760 ntBASIC29.3■■■□□ 2.28
COL22A1Q8NFW1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC29.29■■■□□ 2.28
COL22A1Q8NFW1 AC135731.1-201ENST00000569415 2548 ntBASIC29.29■■■□□ 2.28
COL22A1Q8NFW1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL22A1Q8NFW1 AC026366.1-201ENST00000488803 879 ntBASIC29.29■■■□□ 2.28
COL22A1Q8NFW1 EEF1DP3-203ENST00000566025 782 ntBASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms