Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CFAP43Q8NDM7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
CFAP43Q8NDM7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
CFAP43Q8NDM7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC34.16■■■■□ 3.06
CFAP43Q8NDM7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 POU5F1P3-201ENST00000428824 1078 ntBASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CFAP43Q8NDM7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 LINC01960-201ENST00000563759 1884 ntBASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC34.14■■■■□ 3.06
CFAP43Q8NDM7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC34.13■■■■□ 3.05
CFAP43Q8NDM7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
CFAP43Q8NDM7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 AC007322.1-201ENST00000426983 750 ntBASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 KRT87P-202ENST00000534226 1464 ntBASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
CFAP43Q8NDM7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 CNN2P6-201ENST00000439038 900 ntBASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 AC104187.1-201ENST00000607510 612 ntBASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC34.11■■■■□ 3.05
CFAP43Q8NDM7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC34.1■■■■□ 3.05
CFAP43Q8NDM7 AC098590.1-201ENST00000468126 897 ntBASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 MYCNOS-205ENST00000641950 531 ntBASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
CFAP43Q8NDM7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CFAP43Q8NDM7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC34.08■■■■□ 3.05
CFAP43Q8NDM7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CFAP43Q8NDM7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC34.08■■■■□ 3.05
CFAP43Q8NDM7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
CFAP43Q8NDM7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 RPS2P52-201ENST00000469610 820 ntBASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC34.07■■■■□ 3.04
CFAP43Q8NDM7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 AC133041.1-202ENST00000642053 222 ntBASIC34.06■■■■□ 3.04
CFAP43Q8NDM7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms