Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 AL499627.2-201ENST00000606283 725 ntBASIC21.28■■□□□ 1
CCNYL1Q8N7R7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.28■■□□□ 1
CCNYL1Q8N7R7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNYL1Q8N7R7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 AL117332.1-201ENST00000622628 974 ntBASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNYL1Q8N7R7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNYL1Q8N7R7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 AC244015.2-201ENST00000616358 1861 ntBASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.24■□□□□ 0.99
CCNYL1Q8N7R7 AC005229.4-201ENST00000610085 2198 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 AL451085.2-201ENST00000605085 799 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MIR6724-1-201ENST00000616420 92 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MIR6724-2-201ENST00000616483 92 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MIR6724-4-201ENST00000617390 92 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MIR6724-3-201ENST00000622482 92 ntBASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCNYL1Q8N7R7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 UNC93B8-201ENST00000511903 705 ntBASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.22■□□□□ 0.99
CCNYL1Q8N7R7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL1Q8N7R7 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms