Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH20Q8N6Y1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH20Q8N6Y1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH20Q8N6Y1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 AC079089.2-201ENST00000531211 1277 ntBASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH20Q8N6Y1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH20Q8N6Y1 LINC02228-203ENST00000641970 1355 ntBASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 BX005040.4-201ENST00000637145 1518 ntBASIC22.01■■□□□ 1.11
PCDH20Q8N6Y1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 ANKRD20A6P-201ENST00000618763 204 ntBASIC22■■□□□ 1.11
PCDH20Q8N6Y1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22■■□□□ 1.11
PCDH20Q8N6Y1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDH20Q8N6Y1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDH20Q8N6Y1 AC034268.1-201ENST00000441047 882 ntBASIC21.99■■□□□ 1.11
PCDH20Q8N6Y1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH20Q8N6Y1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
PCDH20Q8N6Y1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH20Q8N6Y1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH20Q8N6Y1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH20Q8N6Y1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH20Q8N6Y1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH20Q8N6Y1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 AC087742.1-201ENST00000575880 1738 ntBASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 CCDC92B-201ENST00000575506 885 ntBASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 TERF1P2-201ENST00000583350 1212 ntBASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 TPRG1LP1-201ENST00000598702 760 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms