Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SIX5Q8N196 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SIX5Q8N196 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.19■■□□□ 1.14
SIX5Q8N196 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.19■■□□□ 1.14
SIX5Q8N196 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 AC079630.1-202ENST00000618127 1840 ntBASIC22.19■■□□□ 1.14
SIX5Q8N196 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SIX5Q8N196 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SIX5Q8N196 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.19■■□□□ 1.14
SIX5Q8N196 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SIX5Q8N196 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.18■■□□□ 1.14
SIX5Q8N196 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIX5Q8N196 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.18■■□□□ 1.14
SIX5Q8N196 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SIX5Q8N196 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.17■■□□□ 1.14
SIX5Q8N196 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.17■■□□□ 1.14
SIX5Q8N196 RPS2P52-201ENST00000469610 820 ntBASIC22.17■■□□□ 1.14
SIX5Q8N196 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.17■■□□□ 1.14
SIX5Q8N196 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.17■■□□□ 1.14
SIX5Q8N196 AC010536.3-201ENST00000620306 533 ntBASIC22.17■■□□□ 1.14
SIX5Q8N196 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SIX5Q8N196 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIX5Q8N196 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SIX5Q8N196 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.16■■□□□ 1.14
SIX5Q8N196 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIX5Q8N196 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIX5Q8N196 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.15■■□□□ 1.14
SIX5Q8N196 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIX5Q8N196 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIX5Q8N196 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIX5Q8N196 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SIX5Q8N196 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.15■■□□□ 1.14
SIX5Q8N196 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.15■■□□□ 1.14
SIX5Q8N196 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SIX5Q8N196 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.15■■□□□ 1.14
SIX5Q8N196 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.14■■□□□ 1.14
SIX5Q8N196 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.14■■□□□ 1.14
SIX5Q8N196 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SIX5Q8N196 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SIX5Q8N196 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SIX5Q8N196 MIPEPP3-201ENST00000412105 444 ntBASIC22.13■■□□□ 1.13
SIX5Q8N196 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.13■■□□□ 1.13
SIX5Q8N196 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.13■■□□□ 1.13
SIX5Q8N196 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.13■■□□□ 1.13
SIX5Q8N196 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SIX5Q8N196 AP006294.2-201ENST00000641667 209 ntBASIC22.13■■□□□ 1.13
SIX5Q8N196 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
SIX5Q8N196 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.13■■□□□ 1.13
SIX5Q8N196 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SIX5Q8N196 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SIX5Q8N196 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.13■■□□□ 1.13
SIX5Q8N196 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SIX5Q8N196 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 AL353803.4-201ENST00000565882 1934 ntBASIC22.12■■□□□ 1.13
SIX5Q8N196 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.12■■□□□ 1.13
SIX5Q8N196 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.12■■□□□ 1.13
SIX5Q8N196 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.12■■□□□ 1.13
SIX5Q8N196 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.12■■□□□ 1.13
SIX5Q8N196 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.12■■□□□ 1.13
SIX5Q8N196 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.12■■□□□ 1.13
SIX5Q8N196 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SIX5Q8N196 MKRN4P-201ENST00000444706 1521 ntBASIC22.11■■□□□ 1.13
SIX5Q8N196 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIX5Q8N196 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SIX5Q8N196 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SIX5Q8N196 DUSP5P2-201ENST00000426873 1033 ntBASIC22.11■■□□□ 1.13
SIX5Q8N196 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.11■■□□□ 1.13
SIX5Q8N196 AC098590.1-201ENST00000468126 897 ntBASIC22.11■■□□□ 1.13
SIX5Q8N196 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms