Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 AC055733.4-201ENST00000638462 1354 ntBASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 UBE2DNL-204ENST00000602536 740 ntBASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SFTPA1Q8IWL2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 AL355802.2-201ENST00000402069 882 ntBASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 NCF1B-203ENST00000435988 1254 ntBASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 AC079089.2-201ENST00000531211 1277 ntBASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 AL050303.2-201ENST00000619798 666 ntBASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SFTPA1Q8IWL2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 AL109923.1-201ENST00000618799 583 ntBASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.97■■□□□ 1.11
SFTPA1Q8IWL2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 KRT18P11-201ENST00000435214 1283 ntBASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 LINC00526-201ENST00000581067 1875 ntBASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SFTPA1Q8IWL2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SFTPA1Q8IWL2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.95■■□□□ 1.1
SFTPA1Q8IWL2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 DUX4L16-201ENST00000555130 1264 ntBASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 AP001160.3-201ENST00000601484 763 ntBASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 AP004607.7-201ENST00000527152 1677 ntBASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.94■■□□□ 1.1
SFTPA1Q8IWL2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SFTPA1Q8IWL2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SFTPA1Q8IWL2 AC093323.1-202ENST00000635031 2045 ntBASIC21.91■■□□□ 1.1
SFTPA1Q8IWL2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms