Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 AL356740.2-201ENST00000601559 647 ntBASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 AL035685.1-201ENST00000636663 812 ntBASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 CLDN5-201ENST00000403084 2357 ntBASIC13.85□□□□□ -0.19
MRPL55Q7Z7F7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 AL499627.2-201ENST00000606283 725 ntBASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MRPL55Q7Z7F7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.83□□□□□ -0.19
MRPL55Q7Z7F7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
MRPL55Q7Z7F7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.83□□□□□ -0.19
MRPL55Q7Z7F7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
MRPL55Q7Z7F7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MRPL55Q7Z7F7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 WWC2-AS2-201ENST00000578387 2183 ntBASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MRPL55Q7Z7F7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
MRPL55Q7Z7F7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms