Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 CR559946.2-201ENST00000623684 991 ntBASIC16.28■□□□□ 0.2
MRPL54Q6P161 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPL54Q6P161 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.28■□□□□ 0.2
MRPL54Q6P161 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.27■□□□□ 0.2
MRPL54Q6P161 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPL54Q6P161 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MRPL54Q6P161 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPL54Q6P161 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPL54Q6P161 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MRPL54Q6P161 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.27■□□□□ 0.2
MRPL54Q6P161 AC092296.2-201ENST00000589470 999 ntBASIC16.27■□□□□ 0.2
MRPL54Q6P161 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPL54Q6P161 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.27■□□□□ 0.19
MRPL54Q6P161 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.27■□□□□ 0.19
MRPL54Q6P161 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
MRPL54Q6P161 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPL54Q6P161 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
MRPL54Q6P161 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
MRPL54Q6P161 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPL54Q6P161 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MRPL54Q6P161 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 AL592295.1-201ENST00000400984 884 ntBASIC16.25■□□□□ 0.19
MRPL54Q6P161 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.25■□□□□ 0.19
MRPL54Q6P161 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MRPL54Q6P161 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
MRPL54Q6P161 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MRPL54Q6P161 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MRPL54Q6P161 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.24■□□□□ 0.19
MRPL54Q6P161 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 AC026202.3-201ENST00000600805 1127 ntBASIC16.24■□□□□ 0.19
MRPL54Q6P161 RAP2CP1-202ENST00000605179 643 ntBASIC16.24■□□□□ 0.19
MRPL54Q6P161 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MRPL54Q6P161 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MRPL54Q6P161 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL54Q6P161 AC144652.1-201ENST00000609974 1624 ntBASIC16.23■□□□□ 0.19
MRPL54Q6P161 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL54Q6P161 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL54Q6P161 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 ECEL1P2-201ENST00000461596 1295 ntBASIC16.23■□□□□ 0.19
MRPL54Q6P161 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL54Q6P161 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms