Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC138907.5-202ENST00000569484 235 ntBASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 AC016405.3-201ENST00000607710 860 ntBASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCRAQ6ISU1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 AC069236.1-201ENST00000604339 616 ntBASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCRAQ6ISU1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PTCRAQ6ISU1 AC007322.4-201ENST00000509611 723 ntBASIC22.53■■□□□ 1.2
PTCRAQ6ISU1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 ECEL1P3-201ENST00000427961 737 ntBASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCRAQ6ISU1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.51■■□□□ 1.19
PTCRAQ6ISU1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 AC073648.6-201ENST00000641589 218 ntBASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 AC055733.4-201ENST00000638462 1354 ntBASIC22.5■■□□□ 1.19
PTCRAQ6ISU1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTCRAQ6ISU1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTCRAQ6ISU1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms