Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF43Q68DV7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF43Q68DV7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 ID1-201ENST00000376105 1233 ntBASIC22.61■■□□□ 1.21
RNF43Q68DV7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RNF43Q68DV7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF43Q68DV7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF43Q68DV7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF43Q68DV7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF43Q68DV7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RNF43Q68DV7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF43Q68DV7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF43Q68DV7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF43Q68DV7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF43Q68DV7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF43Q68DV7 AL358852.1-201ENST00000623174 1268 ntBASIC22.58■■□□□ 1.21
RNF43Q68DV7 AC092437.1-201ENST00000624794 1048 ntBASIC22.58■■□□□ 1.21
RNF43Q68DV7 AC068587.7-201ENST00000641602 218 ntBASIC22.58■■□□□ 1.21
RNF43Q68DV7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RNF43Q68DV7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
RNF43Q68DV7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
RNF43Q68DV7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 AC027612.3-201ENST00000413684 1047 ntBASIC22.57■■□□□ 1.2
RNF43Q68DV7 AC004911.1-201ENST00000416316 871 ntBASIC22.57■■□□□ 1.2
RNF43Q68DV7 YBX1P1-201ENST00000445822 960 ntBASIC22.57■■□□□ 1.2
RNF43Q68DV7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF43Q68DV7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF43Q68DV7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF43Q68DV7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF43Q68DV7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
RNF43Q68DV7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF43Q68DV7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF43Q68DV7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF43Q68DV7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF43Q68DV7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF43Q68DV7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF43Q68DV7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF43Q68DV7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF43Q68DV7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms