Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DQA1Q5Y7H0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 AC127496.7-201ENST00000625110 1798 ntBASIC20.11■□□□□ 0.81
HLA-DQA1Q5Y7H0 OR7E47P-201ENST00000546390 1422 ntBASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 AC233723.2-201ENST00000623798 2106 ntBASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 AC012676.1-201ENST00000574705 1949 ntBASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 AC137767.1-201ENST00000602918 1920 ntBASIC20.1■□□□□ 0.81
HLA-DQA1Q5Y7H0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQA1Q5Y7H0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 AL358852.1-201ENST00000623174 1268 ntBASIC20.08■□□□□ 0.81
HLA-DQA1Q5Y7H0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQA1Q5Y7H0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.08■□□□□ 0.8
HLA-DQA1Q5Y7H0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQA1Q5Y7H0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.08■□□□□ 0.8
HLA-DQA1Q5Y7H0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 AL354811.1-201ENST00000610286 706 ntBASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DQA1Q5Y7H0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC139530.1-201ENST00000575312 1977 ntBASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC012414.1-201ENST00000556676 535 ntBASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQA1Q5Y7H0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms