Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 AP004607.7-201ENST00000527152 1677 ntBASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 LINC00526-201ENST00000581067 1875 ntBASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ARHGEF16Q5VV41 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 DUSP8P5-201ENST00000422884 1815 ntBASIC24.54■■□□□ 1.52
ARHGEF16Q5VV41 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF16Q5VV41 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 AC087742.1-201ENST00000575880 1738 ntBASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF16Q5VV41 KRT87P-202ENST00000534226 1464 ntBASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF16Q5VV41 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 ESRRAP2-201ENST00000418437 1549 ntBASIC24.5■■□□□ 1.51
ARHGEF16Q5VV41 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 AC080038.1-201ENST00000611274 1154 ntBASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 AC055733.4-201ENST00000638462 1354 ntBASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ARHGEF16Q5VV41 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ARHGEF16Q5VV41 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms