Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 RARRES2P11-201ENST00000635158 484 ntBASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 AC004854.2-201ENST00000608450 1441 ntBASIC20.61■□□□□ 0.89
PRAMEF17Q5VTA0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF17Q5VTA0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 AP004607.4-201ENST00000530158 1459 ntBASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 AC090192.1-201ENST00000517740 490 ntBASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF17Q5VTA0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF17Q5VTA0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF17Q5VTA0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF17Q5VTA0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 C9orf163-202ENST00000624034 2573 ntBASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF17Q5VTA0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF17Q5VTA0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF17Q5VTA0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 AC079089.2-201ENST00000531211 1277 ntBASIC20.54■□□□□ 0.88
PRAMEF17Q5VTA0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms