Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RN7SL471P-201ENST00000580476 299 ntBASIC12.09□□□□□ -0.47
UBR4Q5T4S7 AC142472.1-201ENST00000612013 1741 ntBASIC12.09□□□□□ -0.47
UBR4Q5T4S7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 AC233702.5-201ENST00000584107 538 ntBASIC12.09□□□□□ -0.47
UBR4Q5T4S7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 MYCNOS-205ENST00000641950 531 ntBASIC12.09□□□□□ -0.47
UBR4Q5T4S7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 HLA-J-202ENST00000469281 1241 ntBASIC12.08□□□□□ -0.47
UBR4Q5T4S7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.08□□□□□ -0.47
UBR4Q5T4S7 AC008694.1-202ENST00000636953 945 ntBASIC12.08□□□□□ -0.47
UBR4Q5T4S7 TERF1P5-201ENST00000477545 1207 ntBASIC12.08□□□□□ -0.48
UBR4Q5T4S7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBR4Q5T4S7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 AC087388.1-201ENST00000571370 1112 ntBASIC12.07□□□□□ -0.48
UBR4Q5T4S7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 AL512625.2-201ENST00000417533 625 ntBASIC12.07□□□□□ -0.48
UBR4Q5T4S7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
UBR4Q5T4S7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 MIR6786-201ENST00000616843 113 ntBASIC12.06□□□□□ -0.48
UBR4Q5T4S7 AC013268.1-206ENST00000638368 961 ntBASIC12.06□□□□□ -0.48
UBR4Q5T4S7 AC112229.1-201ENST00000639295 961 ntBASIC12.06□□□□□ -0.48
UBR4Q5T4S7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 BX664615.1-201ENST00000443558 458 ntBASIC12.06□□□□□ -0.48
UBR4Q5T4S7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.06□□□□□ -0.48
UBR4Q5T4S7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 AC009947.2-201ENST00000444014 672 ntBASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UBR4Q5T4S7 KRT17P2-201ENST00000300992 1314 ntBASIC12.05□□□□□ -0.48
UBR4Q5T4S7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC12.04□□□□□ -0.48
UBR4Q5T4S7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms