Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 AC006058.3-201ENST00000606217 1069 ntBASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
SNAPC4Q5SXM2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
SNAPC4Q5SXM2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 AC142381.4-202ENST00000563973 229 ntBASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 OR10C1-204ENST00000622521 1039 ntBASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC35.86■■■■□ 3.33
SNAPC4Q5SXM2 DUSP8P5-201ENST00000422884 1815 ntBASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 AP003733.4-201ENST00000623785 1697 ntBASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 AC128676.1-201ENST00000454392 318 ntBASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 UNC93B4-201ENST00000505679 747 ntBASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC35.85■■■■□ 3.33
SNAPC4Q5SXM2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 TERF1P5-201ENST00000477545 1207 ntBASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 USP36-216ENST00000589424 970 ntTSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC35.84■■■■□ 3.33
SNAPC4Q5SXM2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
SNAPC4Q5SXM2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
SNAPC4Q5SXM2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC35.82■■■■□ 3.33
SNAPC4Q5SXM2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC35.82■■■■□ 3.32
SNAPC4Q5SXM2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC35.81■■■■□ 3.32
SNAPC4Q5SXM2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC35.81■■■■□ 3.32
SNAPC4Q5SXM2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC35.81■■■■□ 3.32
SNAPC4Q5SXM2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 BX276092.2-201ENST00000417668 665 ntBASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SNAPC4Q5SXM2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SNAPC4Q5SXM2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.78■■■■□ 3.32
SNAPC4Q5SXM2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
SNAPC4Q5SXM2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC35.78■■■■□ 3.32
SNAPC4Q5SXM2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC35.78■■■■□ 3.32
SNAPC4Q5SXM2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC35.78■■■■□ 3.32
SNAPC4Q5SXM2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SNAPC4Q5SXM2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC35.77■■■■□ 3.32
SNAPC4Q5SXM2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SNAPC4Q5SXM2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
SNAPC4Q5SXM2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
SNAPC4Q5SXM2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC35.76■■■■□ 3.32
SNAPC4Q5SXM2 DUSP8P3-201ENST00000399571 1760 ntBASIC35.76■■■■□ 3.32
SNAPC4Q5SXM2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC35.76■■■■□ 3.32
SNAPC4Q5SXM2 AL512625.2-201ENST00000417533 625 ntBASIC35.76■■■■□ 3.32
SNAPC4Q5SXM2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.32
SNAPC4Q5SXM2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms