Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 AC005229.4-201ENST00000610085 2198 ntBASIC20.73■□□□□ 0.91
PDCD4Q53EL6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDCD4Q53EL6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 AL031602.1-201ENST00000633169 911 ntBASIC20.71■□□□□ 0.91
PDCD4Q53EL6 PKD1P6-201ENST00000343738 4769 ntBASIC20.71■□□□□ 0.91
PDCD4Q53EL6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.71■□□□□ 0.91
PDCD4Q53EL6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 Z98882.1-201ENST00000622160 2253 ntBASIC20.7■□□□□ 0.9
PDCD4Q53EL6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDCD4Q53EL6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 AC079089.2-201ENST00000531211 1277 ntBASIC20.69■□□□□ 0.9
PDCD4Q53EL6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDCD4Q53EL6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.68■□□□□ 0.9
PDCD4Q53EL6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDCD4Q53EL6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 TSPY9P-201ENST00000440215 945 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 TSPY11P-201ENST00000442607 1045 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 AC239859.2-201ENST00000444165 318 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 AL117332.1-201ENST00000622628 974 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 AC241377.3-202ENST00000626088 1088 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 AC241585.3-202ENST00000628937 1088 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 AC245100.8-202ENST00000629247 1058 ntBASIC20.67■□□□□ 0.9
PDCD4Q53EL6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDCD4Q53EL6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PDCD4Q53EL6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms