Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 AL117328.2-201ENST00000624617 1940 ntBASIC26.32■■□□□ 1.8
RFX7Q2KHR2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX7Q2KHR2 AC080038.3-201ENST00000623346 1952 ntBASIC26.32■■□□□ 1.8
RFX7Q2KHR2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 AC090192.1-201ENST00000517740 490 ntBASIC26.31■■□□□ 1.8
RFX7Q2KHR2 AL137784.2-201ENST00000607332 1000 ntBASIC26.31■■□□□ 1.8
RFX7Q2KHR2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX7Q2KHR2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 AC079089.2-201ENST00000531211 1277 ntBASIC26.3■■□□□ 1.8
RFX7Q2KHR2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.3■■□□□ 1.8
RFX7Q2KHR2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFX7Q2KHR2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX7Q2KHR2 OXCT2P1-201ENST00000447263 1535 ntBASIC26.27■■□□□ 1.8
RFX7Q2KHR2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX7Q2KHR2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 NTF6G-201ENST00000591094 616 ntBASIC26.26■■□□□ 1.79
RFX7Q2KHR2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.26■■□□□ 1.79
RFX7Q2KHR2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.25■■□□□ 1.79
RFX7Q2KHR2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 LINC00526-201ENST00000581067 1875 ntBASIC26.24■■□□□ 1.79
RFX7Q2KHR2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RFX7Q2KHR2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.23■■□□□ 1.79
RFX7Q2KHR2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms