Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 snR63snR63 255 nt3.49□□□□□ -1.85
RPN8Q08723 YDR193WYDR193W 399 nt3.49□□□□□ -1.85
RPN8Q08723 SAY1YGR263C 1275 nt3.49□□□□□ -1.85
RPN8Q08723 HRT3YLR097C 1035 nt3.49□□□□□ -1.85
RPN8Q08723 REH1YLR387C 1299 nt3.49□□□□□ -1.85
RPN8Q08723 YAR1YPL239W 603 nt3.49□□□□□ -1.85
RPN8Q08723 FDH2YPL275W 711 nt3.49□□□□□ -1.85
RPN8Q08723 SUC2YIL162W 1599 nt3.49□□□□□ -1.85
RPN8Q08723 CHK1YBR274W 1584 nt3.49□□□□□ -1.85
RPN8Q08723 STE6YKL209C 3873 nt3.49□□□□□ -1.85
RPN8Q08723 SPA2YLL021W 4401 nt3.49□□□□□ -1.85
RPN8Q08723 CDC45YLR103C 1953 nt3.49□□□□□ -1.85
RPN8Q08723 VID27YNL212W 2349 nt3.48□□□□□ -1.85
RPN8Q08723 YLR177WYLR177W 1887 nt3.48□□□□□ -1.85
RPN8Q08723 HIM1YDR317W 1245 nt3.48□□□□□ -1.85
RPN8Q08723 YDR431WYDR431W 312 nt3.48□□□□□ -1.85
RPN8Q08723 IMP4YNL075W 873 nt3.48□□□□□ -1.85
RPN8Q08723 MDN1YLR106C 14733 nt3.48□□□□□ -1.85
RPN8Q08723 BMT2YBR141C 1014 nt3.47□□□□□ -1.85
RPN8Q08723 MRPL37YBR268W 318 nt3.47□□□□□ -1.85
RPN8Q08723 SNT1YCR033W 3681 nt3.47□□□□□ -1.85
RPN8Q08723 ALE1YOR175C 1860 nt3.47□□□□□ -1.85
RPN8Q08723 GPI1YGR216C 1830 nt3.47□□□□□ -1.85
RPN8Q08723 RPA190YOR341W 4995 nt3.46□□□□□ -1.85
RPN8Q08723 CMK1YFR014C 1341 nt3.46□□□□□ -1.85
RPN8Q08723 CIT1YNR001C 1440 nt3.46□□□□□ -1.86
RPN8Q08723 BAR1YIL015W 1764 nt3.46□□□□□ -1.86
RPN8Q08723 SPO1YNL012W 1896 nt3.46□□□□□ -1.86
RPN8Q08723 YHR069C-AYHR069C-A 363 nt3.46□□□□□ -1.86
RPN8Q08723 MMM1YLL006W 1281 nt3.46□□□□□ -1.86
RPN8Q08723 RIM11YMR139W 1113 nt3.46□□□□□ -1.86
RPN8Q08723 PRX1YBL064C 786 nt3.46□□□□□ -1.86
RPN8Q08723 YOR020W-AYOR020W-A 273 nt3.46□□□□□ -1.86
RPN8Q08723 YMR1YJR110W 2067 nt3.46□□□□□ -1.86
RPN8Q08723 BYE1YKL005C 1785 nt3.46□□□□□ -1.86
RPN8Q08723 MTH1YDR277C 1302 nt3.45□□□□□ -1.86
RPN8Q08723 YRB30YGL164C 1323 nt3.45□□□□□ -1.86
RPN8Q08723 CLB5YPR120C 1308 nt3.45□□□□□ -1.86
RPN8Q08723 YLR345WYLR345W 1530 nt3.45□□□□□ -1.86
RPN8Q08723 FAP7YDL166C 594 nt3.45□□□□□ -1.86
RPN8Q08723 RRP17YDR412W 708 nt3.45□□□□□ -1.86
RPN8Q08723 HTA2YBL003C 399 nt3.45□□□□□ -1.86
RPN8Q08723 RAD10YML095C 633 nt3.45□□□□□ -1.86
RPN8Q08723 GPI2YPL076W 843 nt3.45□□□□□ -1.86
RPN8Q08723 YBR137WYBR137W 540 nt3.45□□□□□ -1.86
RPN8Q08723 PKH1YDR490C 2301 nt3.45□□□□□ -1.86
RPN8Q08723 ZDS2YML109W 2829 nt3.44□□□□□ -1.86
RPN8Q08723 CTR86YCR054C 1692 nt3.44□□□□□ -1.86
RPN8Q08723 VFA1YER128W 612 nt3.44□□□□□ -1.86
RPN8Q08723 YGR149WYGR149W 1299 nt3.44□□□□□ -1.86
RPN8Q08723 YGR161W-CYGR161W-C 279 nt3.44□□□□□ -1.86
RPN8Q08723 PEX1YKL197C 3132 nt3.44□□□□□ -1.86
RPN8Q08723 YEL025CYEL025C 3567 nt3.44□□□□□ -1.86
RPN8Q08723 SPB4YFL002C 1821 nt3.43□□□□□ -1.86
RPN8Q08723 BMH1YER177W 804 nt3.43□□□□□ -1.86
RPN8Q08723 ENT3YJR125C 1227 nt3.43□□□□□ -1.86
RPN8Q08723 TVP18YMR071C 504 nt3.43□□□□□ -1.86
RPN8Q08723 YOR338WYOR338W 1092 nt3.43□□□□□ -1.86
RPN8Q08723 POC4YPL144W 447 nt3.43□□□□□ -1.86
RPN8Q08723 YPR022CYPR022C 3402 nt3.43□□□□□ -1.86
RPN8Q08723 UBX5YDR330W 1503 nt3.43□□□□□ -1.86
RPN8Q08723 YIL082W-AYIL082W-A 4497 nt3.42□□□□□ -1.86
RPN8Q08723 GLO3YER122C 1482 nt3.42□□□□□ -1.86
RPN8Q08723 MSS2YDL107W 1056 nt3.42□□□□□ -1.86
RPN8Q08723 ADH4YGL256W 1149 nt3.42□□□□□ -1.86
RPN8Q08723 CDC8YJR057W 651 nt3.42□□□□□ -1.86
RPN8Q08723 YML053CYML053C 639 nt3.42□□□□□ -1.86
RPN8Q08723 TMA16YOR252W 537 nt3.42□□□□□ -1.86
RPN8Q08723 SPS4YOR313C 1017 nt3.42□□□□□ -1.86
RPN8Q08723 DER1YBR201W 636 nt3.42□□□□□ -1.86
RPN8Q08723 SPT16YGL207W 3108 nt3.42□□□□□ -1.86
RPN8Q08723 URA2YJL130C 6645 nt3.42□□□□□ -1.86
RPN8Q08723 FLO9YAL063C 3969 nt3.42□□□□□ -1.86
RPN8Q08723 MIT1YEL007W 2001 nt3.41□□□□□ -1.86
RPN8Q08723 STE14YDR410C 720 nt3.41□□□□□ -1.86
RPN8Q08723 ECO1YFR027W 846 nt3.41□□□□□ -1.86
RPN8Q08723 MRPL6YHR147C 645 nt3.41□□□□□ -1.86
RPN8Q08723 RPC17YJL011C 486 nt3.41□□□□□ -1.86
RPN8Q08723 YKT6YKL196C 603 nt3.41□□□□□ -1.86
RPN8Q08723 ECM4YKR076W 1113 nt3.41□□□□□ -1.86
RPN8Q08723 GIS2YNL255C 462 nt3.41□□□□□ -1.86
RPN8Q08723 YBL094CYBL094C 333 nt3.41□□□□□ -1.86
RPN8Q08723 PNT1YOR266W 1272 nt3.41□□□□□ -1.86
RPN8Q08723 PLP2YOR281C 861 nt3.41□□□□□ -1.86
RPN8Q08723 ECM8YBR076W 1065 nt3.41□□□□□ -1.86
RPN8Q08723 SMP3YOR149C 1551 nt3.41□□□□□ -1.86
RPN8Q08723 SEA4YBL104C 3117 nt3.41□□□□□ -1.86
RPN8Q08723 POL31YJR006W 1464 nt3.41□□□□□ -1.86
RPN8Q08723 RSF2YJR127C 4143 nt3.4□□□□□ -1.86
RPN8Q08723 tK(UUU)DtK(UUU)D 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)G1tK(UUU)G1 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)G2tK(UUU)G2 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)KtK(UUU)K 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)LtK(UUU)L 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)OtK(UUU)O 73 nt3.4□□□□□ -1.87
RPN8Q08723 tK(UUU)PtK(UUU)P 73 nt3.4□□□□□ -1.87
RPN8Q08723 TDA3YHR009C 1572 nt3.4□□□□□ -1.87
RPN8Q08723 YJL028WYJL028W 336 nt3.4□□□□□ -1.87
RPN8Q08723 APN2YBL019W 1563 nt3.4□□□□□ -1.87
RPN8Q08723 YGK3YOL128C 1128 nt3.4□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms