Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LTBQ06643 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.67■□□□□ 0.74
LTBQ06643 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.67■□□□□ 0.74
LTBQ06643 AL355001.2-201ENST00000620617 1191 ntBASIC19.67■□□□□ 0.74
LTBQ06643 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTBQ06643 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LTBQ06643 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LTBQ06643 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
LTBQ06643 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
LTBQ06643 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 EDA-201ENST00000338901 1233 ntBASIC19.66■□□□□ 0.74
LTBQ06643 AC097381.1-201ENST00000429019 1296 ntBASIC19.66■□□□□ 0.74
LTBQ06643 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 AC010525.1-201ENST00000585559 441 ntBASIC19.66■□□□□ 0.74
LTBQ06643 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 C11orf96-202ENST00000528572 1834 ntBASIC19.66■□□□□ 0.74
LTBQ06643 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LTBQ06643 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LTBQ06643 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.66■□□□□ 0.74
LTBQ06643 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.65■□□□□ 0.74
LTBQ06643 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
LTBQ06643 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LTBQ06643 OR2I1P-207ENST00000453522 948 ntBASIC19.65■□□□□ 0.74
LTBQ06643 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.65■□□□□ 0.74
LTBQ06643 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
LTBQ06643 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LTBQ06643 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTBQ06643 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTBQ06643 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.64■□□□□ 0.73
LTBQ06643 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LTBQ06643 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.64■□□□□ 0.73
LTBQ06643 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTBQ06643 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTBQ06643 PKD1P6-201ENST00000343738 4769 ntBASIC19.63■□□□□ 0.73
LTBQ06643 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LTBQ06643 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.63■□□□□ 0.73
LTBQ06643 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.63■□□□□ 0.73
LTBQ06643 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
LTBQ06643 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.63■□□□□ 0.73
LTBQ06643 AC090192.1-201ENST00000517740 490 ntBASIC19.63■□□□□ 0.73
LTBQ06643 DUX4L19-201ENST00000557448 1267 ntBASIC19.63■□□□□ 0.73
LTBQ06643 AL138724.1-201ENST00000606771 1088 ntBASIC19.63■□□□□ 0.73
LTBQ06643 AC087623.3-201ENST00000607047 1098 ntBASIC19.63■□□□□ 0.73
LTBQ06643 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTBQ06643 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBQ06643 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTBQ06643 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBQ06643 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LTBQ06643 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTBQ06643 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.62■□□□□ 0.73
LTBQ06643 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
LTBQ06643 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.62■□□□□ 0.73
LTBQ06643 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.62■□□□□ 0.73
LTBQ06643 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.61■□□□□ 0.73
LTBQ06643 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
LTBQ06643 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
LTBQ06643 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTBQ06643 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBQ06643 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LTBQ06643 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.61■□□□□ 0.73
LTBQ06643 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.61■□□□□ 0.73
LTBQ06643 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTBQ06643 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms