Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 FSH1YHR049W 732 nt4□□□□□ -1.77
VPS38Q05919 DPH1YIL103W 1278 nt4□□□□□ -1.77
VPS38Q05919 YPT7YML001W 627 nt4□□□□□ -1.77
VPS38Q05919 YNR071CYNR071C 1029 nt4□□□□□ -1.77
VPS38Q05919 YOR186WYOR186W 435 nt4□□□□□ -1.77
VPS38Q05919 FDH1YOR388C 1131 nt4□□□□□ -1.77
VPS38Q05919 USV1YPL230W 1176 nt4□□□□□ -1.77
VPS38Q05919 ALO1YML086C 1581 nt4□□□□□ -1.77
VPS38Q05919 RAD54YGL163C 2697 nt4□□□□□ -1.77
VPS38Q05919 VPS27YNR006W 1869 nt4□□□□□ -1.77
VPS38Q05919 YPR022CYPR022C 3402 nt4□□□□□ -1.77
VPS38Q05919 CDC45YLR103C 1953 nt4□□□□□ -1.77
VPS38Q05919 YPR003CYPR003C 2265 nt4□□□□□ -1.77
VPS38Q05919 BUD27YFL023W 2391 nt3.99□□□□□ -1.77
VPS38Q05919 RNA14YMR061W 2034 nt3.99□□□□□ -1.77
VPS38Q05919 RPL35BYDL136W 363 nt3.99□□□□□ -1.77
VPS38Q05919 YDR526CYDR526C 471 nt3.99□□□□□ -1.77
VPS38Q05919 YHI9YHR029C 885 nt3.99□□□□□ -1.77
VPS38Q05919 AIM23YJL131C 1071 nt3.99□□□□□ -1.77
VPS38Q05919 ARC19YKL013C 516 nt3.99□□□□□ -1.77
VPS38Q05919 YLR163W-AYLR163W-A 114 nt3.99□□□□□ -1.77
VPS38Q05919 YBL010CYBL010C 843 nt3.99□□□□□ -1.77
VPS38Q05919 YOR263CYOR263C 408 nt3.99□□□□□ -1.77
VPS38Q05919 HSH49YOR319W 642 nt3.99□□□□□ -1.77
VPS38Q05919 ATG5YPL149W 885 nt3.99□□□□□ -1.77
VPS38Q05919 SPN1YPR133C 1233 nt3.99□□□□□ -1.77
VPS38Q05919 SHR3YDL212W 633 nt3.98□□□□□ -1.77
VPS38Q05919 PLP1YDR183W 693 nt3.98□□□□□ -1.77
VPS38Q05919 HAT2YEL056W 1206 nt3.98□□□□□ -1.77
VPS38Q05919 RSM26YJR101W 801 nt3.98□□□□□ -1.77
VPS38Q05919 YLR428CYLR428C 345 nt3.98□□□□□ -1.77
VPS38Q05919 YML047W-AYML047W-A 366 nt3.98□□□□□ -1.77
VPS38Q05919 YNL181WYNL181W 1224 nt3.98□□□□□ -1.77
VPS38Q05919 COS1YNL336W 1146 nt3.98□□□□□ -1.77
VPS38Q05919 CPR8YNR028W 927 nt3.98□□□□□ -1.77
VPS38Q05919 PNO1YOR145C 825 nt3.98□□□□□ -1.77
VPS38Q05919 POF1YCL047C 777 nt3.98□□□□□ -1.77
VPS38Q05919 UBX5YDR330W 1503 nt3.98□□□□□ -1.77
VPS38Q05919 PRP3YDR473C 1410 nt3.97□□□□□ -1.77
VPS38Q05919 RDS1YCR106W 2499 nt3.97□□□□□ -1.77
VPS38Q05919 ASI1YMR119W 1875 nt3.97□□□□□ -1.77
VPS38Q05919 MIC60YKR016W 1623 nt3.97□□□□□ -1.77
VPS38Q05919 YDR271CYDR271C 372 nt3.97□□□□□ -1.77
VPS38Q05919 GVP36YIL041W 981 nt3.97□□□□□ -1.77
VPS38Q05919 ALB1YJL122W 528 nt3.97□□□□□ -1.77
VPS38Q05919 YKL162CYKL162C 1209 nt3.97□□□□□ -1.77
VPS38Q05919 RPF2YKR081C 1035 nt3.97□□□□□ -1.77
VPS38Q05919 URA4YLR420W 1095 nt3.97□□□□□ -1.77
VPS38Q05919 PML39YML107C 1005 nt3.97□□□□□ -1.77
VPS38Q05919 TRM12YML005W 1389 nt3.97□□□□□ -1.77
VPS38Q05919 NUF2YOL069W 1356 nt3.97□□□□□ -1.77
VPS38Q05919 PLM2YDR501W 1566 nt3.97□□□□□ -1.77
VPS38Q05919 MNR2YKL064W 2910 nt3.97□□□□□ -1.77
VPS38Q05919 MTH1YDR277C 1302 nt3.96□□□□□ -1.77
VPS38Q05919 TPD3YAL016W 1908 nt3.96□□□□□ -1.78
VPS38Q05919 tL(UAG)JtL(UAG)J 82 nt3.96□□□□□ -1.78
VPS38Q05919 tL(UAG)L1tL(UAG)L1 82 nt3.96□□□□□ -1.78
VPS38Q05919 tL(UAG)L2tL(UAG)L2 82 nt3.96□□□□□ -1.78
VPS38Q05919 FIP1YJR093C 984 nt3.96□□□□□ -1.78
VPS38Q05919 SRP40YKR092C 1221 nt3.96□□□□□ -1.78
VPS38Q05919 RIF2YLR453C 1188 nt3.96□□□□□ -1.78
VPS38Q05919 YML094C-AYML094C-A 402 nt3.96□□□□□ -1.78
VPS38Q05919 MED11YMR112C 396 nt3.96□□□□□ -1.78
VPS38Q05919 IST1YNL265C 897 nt3.96□□□□□ -1.78
VPS38Q05919 YOL162WYOL162W 648 nt3.96□□□□□ -1.78
VPS38Q05919 RPS11BYBR048W 471 nt3.96□□□□□ -1.78
VPS38Q05919 HPA2YPR193C 471 nt3.96□□□□□ -1.78
VPS38Q05919 FRM2YCL026C-A 582 nt3.96□□□□□ -1.78
VPS38Q05919 RRP7YCL031C 894 nt3.96□□□□□ -1.78
VPS38Q05919 PUB1YNL016W 1362 nt3.96□□□□□ -1.78
VPS38Q05919 APN2YBL019W 1563 nt3.96□□□□□ -1.78
VPS38Q05919 TAF8YML114C 1533 nt3.95□□□□□ -1.78
VPS38Q05919 TAF1YGR274C 3201 nt3.95□□□□□ -1.78
VPS38Q05919 DSL1YNL258C 2265 nt3.95□□□□□ -1.78
VPS38Q05919 GRS2YPR081C 1857 nt3.95□□□□□ -1.78
VPS38Q05919 MDM10YAL010C 1482 nt3.95□□□□□ -1.78
VPS38Q05919 UBC8YEL012W 657 nt3.95□□□□□ -1.78
VPS38Q05919 BMH1YER177W 804 nt3.95□□□□□ -1.78
VPS38Q05919 GSP1YLR293C 660 nt3.95□□□□□ -1.78
VPS38Q05919 RPC34YNR003C 954 nt3.95□□□□□ -1.78
VPS38Q05919 PFK27YOL136C 1194 nt3.95□□□□□ -1.78
VPS38Q05919 PLP2YOR281C 861 nt3.95□□□□□ -1.78
VPS38Q05919 BUD5YCR038C 1929 nt3.95□□□□□ -1.78
VPS38Q05919 DAN4YJR151C 3486 nt3.94□□□□□ -1.78
VPS38Q05919 GRX3YDR098C 858 nt3.94□□□□□ -1.78
VPS38Q05919 YFR032C-BYFR032C-B 264 nt3.94□□□□□ -1.78
VPS38Q05919 YGL006W-AYGL006W-A 111 nt3.94□□□□□ -1.78
VPS38Q05919 YJR112W-AYJR112W-A 330 nt3.94□□□□□ -1.78
VPS38Q05919 RIM11YMR139W 1113 nt3.94□□□□□ -1.78
VPS38Q05919 RUF21RUF21 707 nt3.94□□□□□ -1.78
VPS38Q05919 YNL035CYNL035C 1170 nt3.94□□□□□ -1.78
VPS38Q05919 SYC1YOR179C 567 nt3.94□□□□□ -1.78
VPS38Q05919 YBR096WYBR096W 693 nt3.94□□□□□ -1.78
VPS38Q05919 YBR141W-AYBR141W-A 96 nt3.94□□□□□ -1.78
VPS38Q05919 TAF7YMR227C 1773 nt3.94□□□□□ -1.78
VPS38Q05919 CEX1YOR112W 2286 nt3.93□□□□□ -1.78
VPS38Q05919 RSM25YIL093C 795 nt3.93□□□□□ -1.78
VPS38Q05919 YBR013CYBR013C 390 nt3.93□□□□□ -1.78
VPS38Q05919 CAF20YOR276W 486 nt3.93□□□□□ -1.78
VPS38Q05919 ICS2YBR157C 768 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms