Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CACNA1BQ00975 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1BQ00975 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 OR10C1-204ENST00000622521 1039 ntBASIC20.28■□□□□ 0.84
CACNA1BQ00975 AC008694.1-202ENST00000636953 945 ntBASIC20.28■□□□□ 0.84
CACNA1BQ00975 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
CACNA1BQ00975 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1BQ00975 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1BQ00975 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1BQ00975 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1BQ00975 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1BQ00975 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1BQ00975 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1BQ00975 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1BQ00975 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1BQ00975 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1BQ00975 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.27■□□□□ 0.84
CACNA1BQ00975 NTF6B-201ENST00000591913 560 ntBASIC20.27■□□□□ 0.84
CACNA1BQ00975 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1BQ00975 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1BQ00975 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 TSPY7P-201ENST00000431358 1114 ntBASIC20.26■□□□□ 0.83
CACNA1BQ00975 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 UPK3BP1-201ENST00000428678 509 ntBASIC20.26■□□□□ 0.83
CACNA1BQ00975 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 MIR4785-201ENST00000585005 73 ntBASIC20.26■□□□□ 0.83
CACNA1BQ00975 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CACNA1BQ00975 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.26■□□□□ 0.83
CACNA1BQ00975 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1BQ00975 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1BQ00975 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
CACNA1BQ00975 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1BQ00975 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 AP001160.3-201ENST00000601484 763 ntBASIC20.24■□□□□ 0.83
CACNA1BQ00975 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 AL049637.2-201ENST00000641778 930 ntBASIC20.24■□□□□ 0.83
CACNA1BQ00975 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CACNA1BQ00975 AC026396.1-201ENST00000419388 421 ntBASIC20.24■□□□□ 0.83
CACNA1BQ00975 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 TSPY15P-201ENST00000457163 923 ntBASIC20.24■□□□□ 0.83
CACNA1BQ00975 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.24■□□□□ 0.83
CACNA1BQ00975 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1BQ00975 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1BQ00975 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.23■□□□□ 0.83
CACNA1BQ00975 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.23■□□□□ 0.83
CACNA1BQ00975 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CACNA1BQ00975 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CACNA1BQ00975 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms