Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H3AP68431 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H3AP68431 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HIST1H3AP68431 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HIST1H3AP68431 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H3AP68431 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HIST1H3AP68431 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.9■□□□□ 0.62
HIST1H3AP68431 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H3AP68431 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.89■□□□□ 0.62
HIST1H3AP68431 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
HIST1H3AP68431 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H3AP68431 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H3AP68431 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HIST1H3AP68431 FAM99A-202ENST00000538190 1989 ntBASIC18.89■□□□□ 0.61
HIST1H3AP68431 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H3AP68431 AC135279.3-201ENST00000610945 1311 ntBASIC18.89■□□□□ 0.61
HIST1H3AP68431 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H3AP68431 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H3AP68431 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H3AP68431 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H3AP68431 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.88■□□□□ 0.61
HIST1H3AP68431 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIST1H3AP68431 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H3AP68431 AC133561.4-201ENST00000566112 224 ntBASIC18.88■□□□□ 0.61
HIST1H3AP68431 AC233992.3-201ENST00000607491 485 ntBASIC18.88■□□□□ 0.61
HIST1H3AP68431 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
HIST1H3AP68431 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H3AP68431 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H3AP68431 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H3AP68431 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H3AP68431 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H3AP68431 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 AC010542.4-201ENST00000563151 1910 ntBASIC18.87■□□□□ 0.61
HIST1H3AP68431 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
HIST1H3AP68431 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H3AP68431 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.86■□□□□ 0.61
HIST1H3AP68431 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST1H3AP68431 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST1H3AP68431 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST1H3AP68431 AC096631.2-201ENST00000436136 790 ntBASIC18.86■□□□□ 0.61
HIST1H3AP68431 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H3AP68431 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H3AP68431 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H3AP68431 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 AC106739.1-201ENST00000617035 715 ntBASIC18.85■□□□□ 0.61
HIST1H3AP68431 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.85■□□□□ 0.61
HIST1H3AP68431 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H3AP68431 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HIST1H3AP68431 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H3AP68431 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST1H3AP68431 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H3AP68431 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms