Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
RAB1AP62820 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB1AP62820 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB1AP62820 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB1AP62820 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB1AP62820 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB1AP62820 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB1AP62820 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB1AP62820 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB1AP62820 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RAB1AP62820 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.94■□□□□ 0.62
RAB1AP62820 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RAB1AP62820 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RAB1AP62820 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.93■□□□□ 0.62
RAB1AP62820 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB1AP62820 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB1AP62820 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.93■□□□□ 0.62
RAB1AP62820 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.93■□□□□ 0.62
RAB1AP62820 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 GUSBP5-202ENST00000510805 1989 ntBASIC18.93■□□□□ 0.62
RAB1AP62820 AC139530.1-201ENST00000575312 1977 ntBASIC18.93■□□□□ 0.62
RAB1AP62820 AC080038.3-201ENST00000623346 1952 ntBASIC18.93■□□□□ 0.62
RAB1AP62820 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RAB1AP62820 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RAB1AP62820 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB1AP62820 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
RAB1AP62820 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB1AP62820 IRS3P-201ENST00000223076 1006 ntBASIC18.92■□□□□ 0.62
RAB1AP62820 MIR572-201ENST00000384983 95 ntBASIC18.92■□□□□ 0.62
RAB1AP62820 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB1AP62820 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB1AP62820 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.92■□□□□ 0.62
RAB1AP62820 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB1AP62820 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.92■□□□□ 0.62
RAB1AP62820 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB1AP62820 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB1AP62820 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB1AP62820 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB1AP62820 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB1AP62820 OR7E47P-201ENST00000546390 1422 ntBASIC18.91■□□□□ 0.62
RAB1AP62820 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB1AP62820 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB1AP62820 AL024507.2-201ENST00000606070 2574 ntBASIC18.9■□□□□ 0.62
RAB1AP62820 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 LINC00526-201ENST00000581067 1875 ntBASIC18.9■□□□□ 0.62
RAB1AP62820 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB1AP62820 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB1AP62820 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB1AP62820 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB1AP62820 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB1AP62820 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB1AP62820 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB1AP62820 AC105233.4-201ENST00000642045 216 ntBASIC18.9■□□□□ 0.62
RAB1AP62820 AC019069.1-201ENST00000610008 1333 ntBASIC18.9■□□□□ 0.62
RAB1AP62820 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 AC242852.2-201ENST00000615738 1807 ntBASIC18.9■□□□□ 0.62
RAB1AP62820 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB1AP62820 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAB1AP62820 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB1AP62820 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms