Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CDH12P55289 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH12P55289 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH12P55289 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH12P55289 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH12P55289 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.07■□□□□ 0.8
CDH12P55289 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH12P55289 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH12P55289 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH12P55289 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH12P55289 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDH12P55289 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH12P55289 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDH12P55289 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH12P55289 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 CA15P2-201ENST00000611168 834 ntBASIC20.06■□□□□ 0.8
CDH12P55289 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH12P55289 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDH12P55289 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH12P55289 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 AC244015.2-201ENST00000616358 1861 ntBASIC20.05■□□□□ 0.8
CDH12P55289 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH12P55289 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH12P55289 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH12P55289 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH12P55289 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH12P55289 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH12P55289 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH12P55289 GUSBP5-201ENST00000418136 578 ntBASIC20.04■□□□□ 0.8
CDH12P55289 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH12P55289 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH12P55289 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDH12P55289 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH12P55289 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH12P55289 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH12P55289 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH12P55289 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH12P55289 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH12P55289 AL499627.2-201ENST00000606283 725 ntBASIC20.03■□□□□ 0.8
CDH12P55289 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDH12P55289 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH12P55289 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH12P55289 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH12P55289 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH12P55289 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH12P55289 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH12P55289 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH12P55289 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH12P55289 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.02■□□□□ 0.79
CDH12P55289 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CDH12P55289 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms