Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 AUR1YKL004W 1206 nt3.06□□□□□ -1.92
SSU72P53538 YOL019WYOL019W 1656 nt3.06□□□□□ -1.92
SSU72P53538 YPK3YBR028C 1578 nt3.06□□□□□ -1.92
SSU72P53538 MPD1YOR288C 957 nt3.06□□□□□ -1.92
SSU72P53538 FDH1YOR388C 1131 nt3.06□□□□□ -1.92
SSU72P53538 DIB1YPR082C 432 nt3.06□□□□□ -1.92
SSU72P53538 TEC1YBR083W 1461 nt3.06□□□□□ -1.92
SSU72P53538 POF1YCL047C 777 nt3.06□□□□□ -1.92
SSU72P53538 IME4YGL192W 1803 nt3.05□□□□□ -1.92
SSU72P53538 YHR202WYHR202W 1809 nt3.05□□□□□ -1.92
SSU72P53538 DAN4YJR151C 3486 nt3.05□□□□□ -1.92
SSU72P53538 FAR8YMR029C 1572 nt3.05□□□□□ -1.92
SSU72P53538 OSH3YHR073W 2991 nt3.05□□□□□ -1.92
SSU72P53538 PUS9YDL036C 1389 nt3.05□□□□□ -1.92
SSU72P53538 YFL041W-AYFL041W-A 192 nt3.05□□□□□ -1.92
SSU72P53538 YKL071WYKL071W 771 nt3.05□□□□□ -1.92
SSU72P53538 SPC3YLR066W 555 nt3.05□□□□□ -1.92
SSU72P53538 YLR225CYLR225C 1224 nt3.05□□□□□ -1.92
SSU72P53538 ERG2YMR202W 669 nt3.05□□□□□ -1.92
SSU72P53538 YDL180WYDL180W 1644 nt3.04□□□□□ -1.92
SSU72P53538 BUD30YDL151C 582 nt3.04□□□□□ -1.92
SSU72P53538 DPB4YDR121W 591 nt3.04□□□□□ -1.92
SSU72P53538 YDR282CYDR282C 1245 nt3.04□□□□□ -1.92
SSU72P53538 YKE4YIL023C 1041 nt3.04□□□□□ -1.92
SSU72P53538 REX3YLR107W 1215 nt3.04□□□□□ -1.92
SSU72P53538 YBL065WYBL065W 345 nt3.04□□□□□ -1.92
SSU72P53538 PFA4YOL003C 1137 nt3.04□□□□□ -1.92
SSU72P53538 CLB3YDL155W 1284 nt3.03□□□□□ -1.92
SSU72P53538 RPB7YDR404C 516 nt3.03□□□□□ -1.92
SSU72P53538 YDR442WYDR442W 393 nt3.03□□□□□ -1.92
SSU72P53538 DUO1YGL061C 744 nt3.03□□□□□ -1.92
SSU72P53538 AIM25YJR100C 984 nt3.03□□□□□ -1.92
SSU72P53538 UTP11YKL099C 753 nt3.03□□□□□ -1.92
SSU72P53538 ERD2YBL040C 660 nt3.03□□□□□ -1.92
SSU72P53538 PPQ1YPL179W 1650 nt3.03□□□□□ -1.92
SSU72P53538 OAF3YKR064W 2592 nt3.03□□□□□ -1.93
SSU72P53538 SPO71YDR104C 3738 nt3.02□□□□□ -1.93
SSU72P53538 MRPL11YDL202W 750 nt3.02□□□□□ -1.93
SSU72P53538 FCF1YDR339C 570 nt3.02□□□□□ -1.93
SSU72P53538 COQ5YML110C 924 nt3.02□□□□□ -1.93
SSU72P53538 HRT1YOL133W 366 nt3.02□□□□□ -1.93
SSU72P53538 OSW1YOR255W 837 nt3.02□□□□□ -1.93
SSU72P53538 BMS1YPL217C 3552 nt3.02□□□□□ -1.93
SSU72P53538 TIF4631YGR162W 2859 nt3.02□□□□□ -1.93
SSU72P53538 TFC1YBR123C 1950 nt3.01□□□□□ -1.93
SSU72P53538 KAP104YBR017C 2757 nt3.01□□□□□ -1.93
SSU72P53538 CUE3YGL110C 1875 nt3.01□□□□□ -1.93
SSU72P53538 ABD1YBR236C 1311 nt3.01□□□□□ -1.93
SSU72P53538 ATP25YMR098C 1839 nt3.01□□□□□ -1.93
SSU72P53538 GIS4YML006C 2325 nt3.01□□□□□ -1.93
SSU72P53538 YEL074WYEL074W 339 nt3.01□□□□□ -1.93
SSU72P53538 SDP1YIL113W 630 nt3.01□□□□□ -1.93
SSU72P53538 SFH5YJL145W 885 nt3.01□□□□□ -1.93
SSU72P53538 YJR111CYJR111C 852 nt3.01□□□□□ -1.93
SSU72P53538 CDA2YLR308W 939 nt3.01□□□□□ -1.93
SSU72P53538 UNG1YML021C 1080 nt3.01□□□□□ -1.93
SSU72P53538 DSC2YOL073C 969 nt3.01□□□□□ -1.93
SSU72P53538 RET3YPL010W 570 nt3.01□□□□□ -1.93
SSU72P53538 PHO81YGR233C 3537 nt3.01□□□□□ -1.93
SSU72P53538 RDS1YCR106W 2499 nt3.01□□□□□ -1.93
SSU72P53538 RAD7YJR052W 1698 nt3.01□□□□□ -1.93
SSU72P53538 ROD1YOR018W 2514 nt3□□□□□ -1.93
SSU72P53538 SSU1YPL092W 1377 nt3□□□□□ -1.93
SSU72P53538 UTP6YDR449C 1323 nt3□□□□□ -1.93
SSU72P53538 TRX3YCR083W 384 nt3□□□□□ -1.93
SSU72P53538 FAD1YDL045C 921 nt3□□□□□ -1.93
SSU72P53538 MIX14YDR031W 366 nt3□□□□□ -1.93
SSU72P53538 PDS1YDR113C 1122 nt3□□□□□ -1.93
SSU72P53538 SCL1YGL011C 759 nt3□□□□□ -1.93
SSU72P53538 FUR1YHR128W 651 nt3□□□□□ -1.93
SSU72P53538 YKL091CYKL091C 933 nt3□□□□□ -1.93
SSU72P53538 PCD1YLR151C 1023 nt3□□□□□ -1.93
SSU72P53538 CPR3YML078W 549 nt3□□□□□ -1.93
SSU72P53538 TUM1YOR251C 915 nt3□□□□□ -1.93
SSU72P53538 POS5YPL188W 1245 nt3□□□□□ -1.93
SSU72P53538 RPS9BYBR189W 588 nt3□□□□□ -1.93
SSU72P53538 CDC45YLR103C 1953 nt3□□□□□ -1.93
SSU72P53538 VAS1YGR094W 3315 nt2.99□□□□□ -1.93
SSU72P53538 POL2YNL262W 6669 nt2.99□□□□□ -1.93
SSU72P53538 YCL068CYCL068C 783 nt2.99□□□□□ -1.93
SSU72P53538 YIL089WYIL089W 618 nt2.99□□□□□ -1.93
SSU72P53538 DPH1YIL103W 1278 nt2.99□□□□□ -1.93
SSU72P53538 CDC8YJR057W 651 nt2.99□□□□□ -1.93
SSU72P53538 TTI2YJR136C 1266 nt2.99□□□□□ -1.93
SSU72P53538 MTR2YKL186C 555 nt2.99□□□□□ -1.93
SSU72P53538 ASI2YNL159C 870 nt2.99□□□□□ -1.93
SSU72P53538 MDM38YOL027C 1722 nt2.99□□□□□ -1.93
SSU72P53538 RRM3YHR031C 2172 nt2.98□□□□□ -1.93
SSU72P53538 UBC8YEL012W 657 nt2.98□□□□□ -1.93
SSU72P53538 IGO2YHR132W-A 396 nt2.98□□□□□ -1.93
SSU72P53538 YHR173CYHR173C 339 nt2.98□□□□□ -1.93
SSU72P53538 BET1YIL004C 429 nt2.98□□□□□ -1.93
SSU72P53538 tV(CAC)DtV(CAC)D 73 nt2.98□□□□□ -1.93
SSU72P53538 tV(CAC)HtV(CAC)H 73 nt2.98□□□□□ -1.93
SSU72P53538 REE1YJL217W 597 nt2.98□□□□□ -1.93
SSU72P53538 SEC65YML105C 822 nt2.98□□□□□ -1.93
SSU72P53538 SSN8YNL025C 972 nt2.98□□□□□ -1.93
SSU72P53538 RUF5-1RUF5-1 710 nt2.98□□□□□ -1.93
SSU72P53538 RUF5-2RUF5-2 710 nt2.98□□□□□ -1.93
SSU72P53538 VPS21YOR089C 633 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms